The museum's publications are not widespread or large in number, but it has been consinuously producing materual since 1975 when the series “The Questions on the History of the University of Tartu” was published. Some exhibition catalogues, jubilee books and publications related to the popularization of science have also been published.

The publication activities of the museum are focussed on the history of the university as well as science and introducing the collections of the museum.